* Update scaler maps

* Update singles and coin report files

* Update hodo calib

* Add Dipankgar's monitoring scripts

* Fix HMS Cherenkov calibration parameters

* Setup HMS calibration parameters for the Fall run

Add calibration parameters for the HMS calorimeter

* Do the same for the SHMS

* Change default calib files to symbolic links

Updated SHMS HGCER calibration and efficiency scripts to comply with updated calibration for beta and particle ID. Also corrected the timing information to use goodAdcTdcDiffTime branch. Updated new calibration constants. (#342)

Changed calibration script to show timing & beta cut, and changed the cut limits to be consistent with commissioning runs. Updated calibration constants for the HGC as well.

Change ADC time window cut which actually
is now cut on the TDC -ADC time.

Add new hhodo_calib.param from cosmic run 1097

Set cosmicflag=0 in anticipation of beam

Vardan introduce new correction in SHMS Preshower
coordinate calculation

Add new map reference times
Add paramters for adc_tdc_offset

Added
pTOFCalib_shtrk_lo=.6
pTOFCalib_shtrk_hi=1.5
pNumPlanesBetaCalc=3

With the change of units to pC had to multiply
that hodo parameters for the sqrt(adc) correction
by a factor of sqrt(.020).

This makes the beta looks as it did before.

Update HMS/SHMS calibration constants to have units of pC instead of channesl to match updated HCANA

deleted obselete SHMS DC Param file, since I did the calibration for Run 484, and the parameters produced relatively flat drift distances independetn of Run 484 or 488 from KPP

add re-structured SHMS DC Calibration in terms of classes and methods. This is a version of the SHMS DC Calibration code that seems to work. Along with the parameter files produce by it. (#228)

* added files used for shms dc alignment

* moved some dc alignment files around

* removed script in production

* updated shms geo param

* updated plots for shms dc monitoring

* added files used for shms dc alignment

* moved some dc alignment files around

* removed script in production

* Add efficiency calculations for the layers of the calorimeters.

* Add efficiency calculation for the Array part of calorimeter.

* Update phgcer_calib.param

@vardant These calibration numbers should be included in hallc_replay/PARAM/SHMS/HGCER/CALIB/KPP_Spring_2017/.  For reference the gain constants for run 464 were phgcer_adc_to_npe = 1/111., 1/118., 1/122., 1/125.

* Update pcal_geom.param

Fix some typos

* May 26, 2017 -- Long overdue push, some old Calibration Scripts but also the presently working analysis and Calibration scripts in Final Scripts directory.

* Updated Calibration with pulseAmp script.

* root file

* added Rootfiles

* Rewrote pulseAmp analysis, works much better now.
Included Degtiarenko's code to evaluate as a better alternative.
Started the write up for the actual calibration process

* Updated Analysis scripts, started deciphering Fortran code.

* test

* TEST

* test

* bla

* blah

* boring git stuff

* git stuff

* Made the master branch much more organized/presentable

* Finializing directory. Modified how calibration appears/output the calibration constants

* Updated the analysis and visualization scripts for NGC.

* Version of Calibration suitable for the Summer presentation.

* Removed debugging line

* Updating repository with changes made at software workshop

* Added changes to PARAM & DBASE files to take appropriate HGC calibration constants for each run.

* Changed replay output to something more sensible

* Added new Analysis scripts to master

* Removing bloat from merge with branch Ryan

* Removing redundant files from master

* Added properly named, properly formatted calibration scripts to master

* Removed bloat with the README file

* Removed more bloat in data_files

* Updated calibration file

* Updated calibration script to include the NGC as well. Added calibration parameters to PARAM & DBASE in an identical method as the HGC.

* Updated calibraion scripts

* Removed tracking of .gitignore

* Added .gitignore...can't change branches otherwise

* Updated calibration script to include Eric's recommendation of cuting on TracksFired leaf.

* Updated investigation of the integrals of first few photoelectrons

* Updated display to show expected integral based on Poisson statistics

* Updated Calorimeter PARAM CALIB file after discussion with Varden

* Merged efficiencies from development branch to master

* Updated efficiency script to only display info if requested, and will now output the cuts on beta and timing

* Cleaned up efficiencies.C, now in more or less a final stage.
calibration still needs a little cleaning up, especially concerning the poisson/Guassian after processing which yielded little information.

* Updated calibration, much cleaner and sensible

* Added particle ID for tracksfired calibration strategy

* Changed the calibrated histograms to have identical limits/bins. Required merging some bins together from original data...should be okay.

* Updated files to include cut on delta p on all 3 Cherenkovs

* Cleaned up tracksfired calibration strategy

* Added quick README on instructions to run script

* Finialized the quick README.md

* Update README.md

* Update .gitignore

* Deleted unnecessary DBASE files

* Cleaned up Pull request

* Changed Cal Calib run488 file to remove old calib constants

Set pdumptof = 1

Create two files
htofcalib.param
ptofcalib.param

Each of these files sets the flag to dump the tof calibration
data to a file that is designated in the file.
The user has to add a line
gHcParms->Load("PARAM/HMS/HODO/htofcal.param");

or

gHcParms->Load("PARAM/SHMS/HODO/ptofcal.param");
to the replay script to get the  data files hodo calibration

Remove these parameters from the regular hodo calibration files.

* -Modified shms dc calib scripts in accord with the recent hallc replay restructure
-updated Drift Chamber Calib parameters for run 488 after making the changes to the calibration code

* removed tzero offsets from geom param file