* Add directory stucture for report outputs

* Add directory structure for templates

* Add directory structure to SCRIPTS directory

* Remove templates from old directory stucture

* Create SHMS EPICS directory

* Configure stack and scaler replay

Add directroy structure to scripts directory

* Add directories for stack and scalers for report output

* Modify locations of replay scripts, def-files, and templates

* Incoporate fast raster into trigger apparatus and stack map

* Add directory structure to maps

Reconfigure test stand scripts to point to new map loactions

* Add fast raster histograms and aesthetic changes

* Tweak stack & all DEF-files

Rename cut files

Configure separate replay scripts

* Remove REPORT_OUTPUT directory from framework since this file should be sym linked to the RAID disk

* Uncomment histos

* Re-work DEF-file directory structure so that one DEF-file exists for each stack component

Include python script to cat individual DEF-files into single DEF-file

Updated report cuts DEF files

* Add various run specific gain calibration constants for the SHMS HGC & NGC

* Add KPP specific Chrenkov parameter files

* Default to KPP run 488 for now

* Include directory structure for databases

Add specific KPP runs to general database

* Remove deprecated database files

* Modify shms stack analyzer script to handle new DB structure

* Include new DB structure to various replay scripts

* Include calibration constants for the SHMS calorimeter

Add low momentum run to kinematics file

* Add calibration constants for good kpp calo runs

-shortened shms config gui titles
-renamed some histo axes labels on calo/hgc def files (shorten axes label)

-Update the SHMS config files with these new histos

-Minor fix to SHMS DC histo name in def file

* -Added new config file for shms hodo test stand replay
-Modified config file for HGC/NGC/AERO

* -Added new SHMS Calo Confi file
-Minor histo name fix in SHMS CALO Def File

added fadc debug option to shms hodoscopes

* Added Error flag histograms, and relabelled some histogram axes for clarity in
SHMS Hodo test stand DEF-File

* Put some comments

Rename some axes labels and put useful comments regarding the cuts made to obtain GOOD Variables (#159)

Rename some axes labels for SHMS Aero DEF Files, and included som useful comments regarding the cuts made to get good variables (#158)

included block T.shms.* in the calorimeter test stand def file, and relabbeled som axes for clarity (#157)

-Rename some axes labels for clarity, and put useful comments regarding the cuts that were made to obtain good variables (#156)

Add calibration code for the SHMS aerogel detector

-Added "Good": Occupancy, Multiplicity, ADC Pulse Pedestals/Times/int…

-Added "Good": Occupancy, Multiplicity, ADC Pulse Pedestals/Times/integrals/amplitudes, TdcUncorrTimes, TdcCorrTime, and TdcTOFCorrTimes to the hodoscope test stand def file

* Add summer 2017 software analysis workshop example

* Add summer 2017 software analysis workshop example for real this time

* May 26, 2017 -- Long overdue push, some old Calibration Scripts but also the presently working analysis and Calibration scripts in Final Scripts directory.

* Updated Calibration with pulseAmp script.

* root file

* added Rootfiles

* Rewrote pulseAmp analysis, works much better now.
Included Degtiarenko's code to evaluate as a better alternative.
Started the write up for the actual calibration process

* Updated Analysis scripts, started deciphering Fortran code.

* test

* TEST

* test

* bla

* blah

* boring git stuff

* git stuff

* Made the master branch much more organized/presentable

* Finializing directory. Modified how calibration appears/output the calibration constants

* Updated the analysis and visualization scripts for NGC.

* Version of Calibration suitable for the Summer presentation.

* Removed debugging line

Modify TEMPLATES/pstackana.template

1) Added information on time of run and BCMs
2) Conversion of BCM scalers to current is done with constants
   roughly determined from data. Eventually need to
   update to use parameters.

choosing an event range.

* minor fixes to shms dc calib

* Changed the binning scheme in the shms calibrations such that at 0 ns (tzero-corrected) will be centerd about its corresponding bin, and not at an edge.

Dc calib

new script to apply the tzero correction as the plane drift times are filled. For each entry filled, the corresponding wire and plane hit are obtained, and the tzero corresponding to the wire hit is applied.

changed SHMS DC binning to be consistent with calibration. Changed 2ns/bin to 1ns/bin in drift time histos. (#145)

* commented out a cout line

* increased the total number of bins by two, since the bin width was reduced from 2ns to 1ns. This change produced better drift distances

* reduced drift time bin width to 1ns.

* reduced bin width to 1 ns/bin

* reduced bin width to 1 ns /bin

* Updated parameter files

Shms dc calib