* Add SHMS pre-shower sum and make naming consistant

* Update HMS maps

* Update SHMS maps

* Propagate changes to DEF-files

* Propogate changes to SHMS DEFfiles

* Update leaf names

* Update SHMS maps with new naming convention

* Update coin maps

* Update HMS maps

* Update scaler maps

* Update SHMS & HMS report files

* added SHMS preshower to maps

* add shms preshower to SHMS/COIN maps

* updated HMS map files

* minor fix in HMS maps

* updated SHMS map files

* updated coin map

* Fix typo in ptrig.map

* fix minor issue in shms maps

* Update coin.map

* Include new trigger types in the trigger apparatus

* Add new trigger types to scaler maps and database

* Include new trigger types in trigger maps

* Update scaler templates and def files

* Update maps to include new trigger types

* Set scaler event handlers to point at event 129 scaler reads

* Minor changes to pscaler cuts

* Minor changes to SHMS maps

* Minor changes to HMS maps

* Update merge list

* Update crate 3 map for coin

* Update coin maps

* Initial attempt at coincidence replay

* Update coin maps and replay script

* Update SHMS maps with FADC reference times

* Same for HMS

* Add FADC reference times to coin maps

* ignor nfs temp files

* Minor changes to SHMS maps

* Minor changes to HMS maps

* Update merge list

* Update crate 3 map for coin

* Update coin maps

* Initial attempt at coincidence replay

* Update coin maps and replay script

* Fix hodoscope reference time

* Change window size and color for online SHMS config files

* Change online HMS config window sizes and color

* Fix typo

* Include trigger apparatus reference time into param list

* Inlcude trigger apparatus reference times into trigger maps

* Update HMS maps accordingly

* Update SHMS maps accordingly

* Add SHMS FADC reference time signal

* Modify report files and templates to better quantify the deadtimes

* Push initial changes for Steve

* Include failed state of HMS scalers replay script

* Include proper(?) method for obtaining event 129 scaler reads

* Ensure that trigger apparatus cut file has similar flow to stack and production to avoid confusion

* Remove reference time which serves as a reference time for the trigger apparatus

* Update maps corresponding to previous commit

* Ignore # files

* Update test stand cuts file to match production and stack

* Update test stand cuts file to match production and stack on HMS side

* Include consolidated SHMS TI trigger inputs into HMS trigger maps

* Include SHMS TI trigger inputs into HMS test stand maps

* Include consolidated HMS TI trigger inputs into SHMS trigger maps

* Include HMS TI trigger inputs into SHMS test stand maps

* Point HMS DC test stand to 6 GeV chamber histos

* Update scaler map and database to include mixed HMS and SHMS triggers

* Add ignore stuff

* Include TI trigger inputs into scalers

* Add TI trigger inputs to param files

* Add TI trigger inputs to trigger maps

* Add HMS trigger apparatus variables to trigger test stand

* Remove raster from trigger apparatus map

Update HMS maps to include new TI trigger inputs

* Remove fast raster from trigger apparatus map

* Add TI trigger inputs to SHMS maps

* added HODO EDTM to Maps and Param filrs for HMS/SHMS; Added block T.hms.* in epics_short.def in order to produce HMS Hodo EDTM leaf variable; Added Hodo EDTM to scaler.map

* undo changes in HMS hodo naming schemes for scalers map

* Add directory stucture for report outputs

* Add directory structure for templates

* Add directory structure to SCRIPTS directory

* Remove templates from old directory stucture

* Create SHMS EPICS directory

* Configure stack and scaler replay

Add directroy structure to scripts directory

* Add directories for stack and scalers for report output

* Modify locations of replay scripts, def-files, and templates

* Incoporate fast raster into trigger apparatus and stack map

* Add directory structure to maps

Reconfigure test stand scripts to point to new map loactions

* Add fast raster histograms and aesthetic changes

* Tweak stack & all DEF-files

Rename cut files

Configure separate replay scripts

* Remove REPORT_OUTPUT directory from framework since this file should be sym linked to the RAID disk

* Uncomment histos

* Re-work DEF-file directory structure so that one DEF-file exists for each stack component

Include python script to cat individual DEF-files into single DEF-file

* Add reference channels to hdc map.  Change detector id to 22

* Add hodoscope TDC channels.

* Add shms trigger map

* Add shms trigger parameter file

* Minor changes to replay scripts

* Minor changes to hodoscope map and def files. THis work is not complete

* Add hodoscope/trigger combined map

* Correct TDC's in hodoscope map

* Add hodoscope + trigger map.  Corrections to trigger map.

* Minor changes to hodoscope replay script

* Run hdc map through merge_maps python script for aesthetic purposes

* Add reference times to shms hodoscope map

* Add reference time for hodoscope in hodo/trig map

* Add reference times for HMS hodoscope in maps.

* Add reference times to mutli-detector maps

* Add histoagrams for pedestal and tdc's in hodo def file.

* Tweaks to pdc def file

* Minor tweaks to phodo and pdc replay scripts

* Add test stand param to turn off hodoscope reliance on tracking and rid of extraneous files.

* Incorporate SHMS pre-shower and shower in the hallc replay framework

* Add SHMS trigger replay framework

* Add SHMS trigger replay framework...all of it this time

* Add histos to hcal and hhodo def files