2)added eHadron coin offset parameter
3)added HMS/SHMS central pathlength parameter

* Update SHMS HGC and NGC ADC timing cuts

* Update kinematics file

* Move gtr quantities to physics block

* Update coin kinematics files

* Point 1190 buffer monitroing to reference times used by hcana

* Update online GUI to new 1190 reference time monitroing histo

* Update test stand cut files to decode properly

* Add coin replay path to cal calib scripts

* Update replay scripts to include bcm module, they are commented out for now

* Update hcer fadc time cuts

* Comment out bcm block variables

* Update coin kinematics file

* Add shms coin replay script

* Updated cointime calculations to include focal plane hit times

* Add timing cuts for SHMS Shower and Preshower.

THe SHMS delta reconstruction was determined
by running COSY with all quads 1.018 times
higher than the nominal tune.

The ytar,yptar and xptar recon matrix are from the
fit by Holly in shms-2017-optimized_2plow.dat

Need for correction of time slipage between FADC
relative to TI clock.

Report charge in mC instead of uC

Generalized calibration to first determine appropriate timing cuts (hence new "preprocess" files), removing the need of arbitrary hard-coded timing values.

Modify hcana.param and hmsflags.param to use the
  latest matrix fit.

Modify pcana.param and shmsflags.param to use the
  latest matrix fit.

* Include helicity scalers to scaler maps

* Update trigger detector maps

* Update parameter files with helicity channels

* added HMS ME and readme

* add y center offset found from optics

* hmsflags to be used with optimized hms ME

* mod readme

* set wire t0 = card t0 in card mode (fixes anomaly in parameter file) :: set good event definition as ndata==1 && cal_energy>0.1 && cer_npe>1.0

* minor fix in wire t0 tzero determination from card tzero

* added t0_card_err criteria to determine whether to set t0 per card to zero because of low statistics. (Some edge cards also have low statistics when the calibration has PID cuts )

* Added GetCardT0_alternative() method, which determines the T0 of the per-card drift time if certain criteria are met, such as the number of entries per card. This method was developed to correctly account for the T0 for edge cards with low statistics. Although this is rare to find, there were ocassions in which entries for edge cards were low adter applying PID cuts.

* moved 'old_scripts' directory to UTIL_ED

* Added optional num_evts argument to take '-1' as an option to loop over all events in the TTree.

* updated good_event definition: X.cal.etot>0.1&&X.cer_npeSum>1.0&&(5/6 PLANE HITS)

* added percent variable to determine fit region for HMS/SHMS independently

* add t0_err_threshold as criteria for accepting good wire drift time fits

* Started to implement Per Card DC Calibration: 1)Added per-card methods in header file, 2)Added varible plane_cars[NPLANES] to store max number of disc. cards in a plane

* added per-card histogram definitions

* added GetCard() method

* Added option to calibrated by card ... Currently working on EventLoop() method

* Implement GetCard() method within EventLoop() method :: Add option to fill uncorrected plane and card drift times while in 'card' mode during the calibration

* added GetTwentyPercent_Card() method

* added FitCardDriftTime() method

* re-arranged methods

* added card histograms to WriteToFile() method

* added mode string to setup directory methood

* Working version of DC Calib using 'card' optional argument

* Finished implementing per card DC Calibration

* remove optional flag dc_1hit, since ndata==1 cut was made a requirement for good track

* remove useless method printInitVar() :: remove useless variable dir_log_name

* remove pintInit() method from main_calib.C :: rename offset to tdc_offset

* Added SetTdcOffset() method to initialize the tdc offsets values independently of the event loop, and save some lines of coding

* incorporated ApplyTZeroCorrection() Method into the EventLoop() Method, with an oprional parameter. This way, there will be a single event loop in the entire code

* removed un-necessary ndata_wirenum variable. Removed pid_hadron optional flag, removed h(p)EL_CLEAN tdcTime cut since it is too restrictive, and cerenkov/calorimeter cuts can be used instead

* added chamber1/2 hit counters to require at least 5/6 planes hit per event per chamber as critereon for good event

* Added option to EventLoop() method to fill Uncorrected times