THcShowerArray
1) in ProcessHits methodfFixed mistake in index of fThresh
   was using padnum instead of padnum-1
2) add parameter pcal_arr_AdcThreshold so that threshold
   can be set by a parameter. Default is zero which gives
   the best resolution.

THcShowerPlane
1) Added the parameter cal_AdcNegThreshold and cal_AdcPosThreshold
   so that the threshold can be set through a parameter
   Previously it was hardcoded.

Main purposes:
1) Add the possibility of multiple ADC hits per channel and
   select best ADC by a time window.
2) Change ProcessHits method in ShowerPlane and ShowerArray to only
    fill "raw" TClonesArrays.
3) Add CoarseProcessHits method to ShowerPlane and ShowerArray
    to fill the "good" data arrays from call in THcShower:CoarseProcess
4) Moved code to fill Track object with energy from FineProcess
   to CoarseProcess so that the Track->Get(Energy) can be used by other
    detectors in their FineProcess.
5) FineProcess loops over Track object add gets Track energy
6) Add AdcErrorFlag TClonesArray to be filled to check for
   problems with FADC




THcShower.h
1) Add methods GetADCMode(),GetAdcTimeWindowMin(),GetAdcTimeWindowMax()
    so that the ShowerPlane can access these parameters
2) Add parameters ADCMode,fAdcTimeWindowMin,fAdcTimeWindowMax
3) Add variables
   fNclustTrack : NUmber of cluster that matches best track
   fXclustTrack : X pos of cluster that matches best track
   fXTrack      : X pos of best track that matches cluster
   fEtrack  : Cluster energy associated with best track
   fEtrackNorm  : Cluster energy/Track momentum associated with best track
THcShower.cxx
1) Add calls to THcShowerPlane and THcShowerArray CoarseProcessHits
    in CoarseProcess
2) Moved filling of Energy in Track object to CoarseProcess
3) In FineProcess get the "best" Track object and match
   Track energy and trajectory to cluster.

THcShowerArray.h and cxx
1)add parameters fADCMode, fAdcTimeWindowMin and fAdcTimeWindowMax
2) Add method CoarseProcessHits
3) In ProcessHits fill fPosThresh and fNegThresh with a fix
    value of 250 integrated channels above pedestal.
     Need to make this a parameter.

THcShowerPlane.h and cxx
1)Gets fADCMode, fAdcTimeWindowMin and fAdcTimeWindowMax from THcShower
2) Add method CoarseProcessHits
3) In ProcessHits fill fPosThresh and fNegThresh with a fix
    value of 250 integrated channels above pedestal.
     Need to make this a parameter.

	Cycle over array of pedestal subtracted fADC signals fA_p in
	the same order as it was filled.

 - Added new leafs to the hodoscope tree.
 - Added new leafs to the aerogel tree.
 - Added new leafs to cerenkov tree.
 - Added new leafs to the shower tree.

Left all the old leafs in there. Will need a careful cleanup...

The new class THcRawAdcHit is meant to represent the raw ADC hits. The
logic with dealing with ADCs has become quite complex now and it would
have to be multiplicated across all detectors that have ADC
channels. While this by itself is not such a big problem, fixing
possible bugs in multiple places is.

I also redesigned the THcRawShowerHit class to use the new
THcRawAdcHit. The redesign was due anyway, so I took the opportunity.

I also had to modify THcShowerArray and THcShowerPlane. They still
need some work to use the the new flash 250 data, but changes were
necessary anyway.

Minor fix 01.

    shms-calo-test directory comprises codes for testing. The 1-st
    layer of SOS calorimeter mimicks the SHMS Preshower, and positive
    side of the 2-nd layer mimicks fly's eye part.

fly's eye part.

from SHMS shower counter. Make THcShowerArray a friend class to
THcShower in order to have access to the debug flags.

  Enable by defining HITPIC in THcShowerArray.h

  GetData accepts a pedestal range and an integration range.
  Samples in the integration range are added after subtracting the
  average of the pedestal range from each sample.
  Method also provided to return dynamic pedestal

  A shower counter hit can now be multiple samples, with a different
  number of samples allowed for positive and negative tubes.
  GetData(signal) now returns the sum of all the samples.  This should
  still be compatible with fastbus ADCs as they are a single sample
  (which is already the integral.)

  Added as an optional sub detector THcShowerArray to the THcShower class
  Get hit data with GetData method instead of hit member variables
    so as to be compatible with FADC compatible hit list