Singularity

Bootstrap: docker
From: hallac/hcana:latest


%help
  Hall A/C container.
  Tools:
     - evio        : EVIO DAQ data format  
     - analyzer    : Hall A analyzer (podd) 
     - hcana       : Hall C analyzer (hcana)

%labels
  Maintainer "Whitney Armstrong, Sylvester Joosten"
  Version v1.0

%setup -c /bin/bash
  export SINGULARITY_SHELL=/bin/bash

%environment -c /bin/bash
  export PYTHONPATH=/usr/local/lib:${PYTHONPATH}
  export PATH=/usr/local/bin:${PATH}
  export LD_LIBRARY_PATH=/usr/local/lib:$LD_LIBRARY_PATH
  export ROOT_INCLUDE_PATH=/usr/local/include:/usr/local/include/podd:/usr/local/include/hcana

%post -c /bin/bash
  echo "Hello from post"
  echo "Install additional software here"
  source /usr/local/bin/thisroot.sh
  ## libformat and nlohmann json used heavily in new generation replay scripts
  ## libformat
  cd /tmp && git clone https://github.com/fmtlib/fmt.git && cd fmt && \
    git checkout 5.3.0 && mkdir /tmp/build && cd /tmp/build && \
    cmake -DBUILD_SHARED_LIBS=TRUE ../fmt &&
    make -j4 install && cd /tmp && rm -r /tmp/build && rm -r /tmp/fmt
  ## json
  apt-get install nlohmann-json-dev

# =======================
# global
# =======================

%runscript
  echo "Launching a shell in the Hall A/C singularity container
  exec bash


# =======================
# root
# =======================
%apprun root
  root "$@"

%appenv root
  export PYTHONPATH=/usr/local/lib:${PYTHONPATH}
  export PATH=/usr/local/bin:${PATH}
  export LD_LIBRARY_PATH=/usr/local/lib:$LD_LIBRARY_PATH
  export ROOT_INCLUDE_PATH=/usr/local/include/podd:/usr/local/include/hcana

# =======================
# analyzer
# =======================
%apprun analyzer
  analyzer "$@"

%appenv analyzer
  export PYTHONPATH=/usr/local/lib:${PYTHONPATH}
  export PATH=/usr/local/bin:${PATH}
  export LD_LIBRARY_PATH=/usr/local/lib:$LD_LIBRARY_PATH
  export ROOT_INCLUDE_PATH=/usr/local/include/podd:/usr/local/include/hcana

# =======================
# hcana
# =======================
%apphelp hcana
  Run the Hall-C analyzer with same root-style arguments.

%apprun hcana
  hcana "$@"

%appenv hcana
  export DB_DIR=DBASE
  export PYTHONPATH=/usr/local/lib:${PYTHONPATH}
  export PATH=/usr/local/bin:${PATH}
  export LD_LIBRARY_PATH=/usr/local/lib:$LD_LIBRARY_PATH
  export ROOTSYS=/usr/local
  export ROOT_INCLUDE_PATH=/usr/local/include

# =======================
# root-config
# =======================
%apprun root-config
  root-config "$@"

%appenv root-config
  export PYTHONPATH=/usr/local/lib:${PYTHONPATH}
  export PATH=/usr/local/bin:${PATH}
  export LD_LIBRARY_PATH=/usr/local/lib:$LD_LIBRARY_PATH
  export ROOT_INCLUDE_PATH=/usr/local/include/podd:/usr/local/include/hcana


# =======================
# rootbrowse
# =======================
%apprun rootbrowse
  rootbrowse "$@"

%appenv rootbrowse
  export PYTHONPATH=/usr/local/lib:${PYTHONPATH}
  export PATH=/usr/local/bin:${PATH}
  export LD_LIBRARY_PATH=/usr/local/lib:$LD_LIBRARY_PATH
  export ROOT_INCLUDE_PATH=/usr/local/include/podd:/usr/local/include/hcana

# =======================
# rootls
# =======================
%apprun rootls
  rootls "$@"

%appenv rootls
  export PYTHONPATH=/usr/local/lib:${PYTHONPATH}
  export PATH=/usr/local/bin:${PATH}
  export LD_LIBRARY_PATH=/usr/local/lib:$LD_LIBRARY_PATH
  export ROOT_INCLUDE_PATH=/usr/local/include/podd:/usr/local/include/hcana