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Commit 8b0d29be authored by Yifan Zhu's avatar Yifan Zhu Committed by Adam J. Stewart
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New package ncbi-magicblast (#8517)

* ncbi-magicblast: new package

* updated package.py

* updated ncbi-magicblast
parent 259b1834
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##############################################################################
# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class NcbiMagicblast(AutotoolsPackage):
"""Magic-BLAST is a tool for mapping large next-generation RNA or DNA
sequencing runs against a whole genome or transcriptome. """
homepage = "https://ncbi.github.io/magicblast/"
url = "ftp://ftp.ncbi.nlm.nih.gov/blast/executables/magicblast/1.3.0/ncbi-magicblast-1.3.0-src.tar.gz"
version('1.3.0', '2615b919c1fe1bf7dc3d816392ab4420')
depends_on('lmdb')
configure_directory = 'c++'
def configure_args(self):
return ['--without-internal']
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