* Update scaler maps

* Update singles and coin report files

* Update hodo calib

* Add Dipankgar's monitoring scripts

* Update coincidence report template and replay scripts

* Fix BCM label typo

* Include Dipangkar ep coin work

* Add coincidence scaler infrastructure

* Move EDTM cuts to decode block

* General updates

* Update leaf names

* Update SHMS maps with new naming convention

* Update coin maps

* Update HMS maps

* Update scaler maps

* Update SHMS & HMS report files

* Update coin kinematics db

* Include coincidence event types

* Add event type summary

* Add single arm coincidence replays

* Add prescaled live time measurement calculation

* Update parameter files and create appropriate default calib files for HMS

* Fix template file

Calculate live/dead time for PS1 as an example

Fix stupid typo

Fix stupid typo

- no longer needed now that the true prescale factors are available
  ghconfig_ti_ps_factors[i]

- Requires hcana commit af83fe852ef592053dd38ac5f9ced5c3cf571710
  (Tue Dec 12 22:24:52 2017)

* Update templates so that scalers and production are calculating the computer live time in the same manner

* Update replay scripts to include the configuration event handler and correct event types in the scaler replays

* Update various DEFfiles so that the report file quantities are consistent

Live time calculation was using the wrong scaler.

* Include new trigger types in the trigger apparatus

* Add new trigger types to scaler maps and database

* Include new trigger types in trigger maps

* Update scaler templates and def files

* Update maps to include new trigger types

* Set scaler event handlers to point at event 129 scaler reads

* Minor changes to pscaler cuts

* General formatting on pstackana.template. Template and cut file for hstackana_production.

* Edits to non-kpp template and cuts file.

* Incorporate event 129 into scaler reads

* Add configuration event handler

* Add pre-scale values and factors, also had HMS hodoscope scaler info

* Fix typo

With the new HMS chambers, need to have separate HMS KPP
  replay script.

Also add gscalers.param to the HMS/GEN/general.param

* Add SHMS FADC reference time signal

* Modify report files and templates to better quantify the deadtimes

* Push initial changes for Steve

* Include failed state of HMS scalers replay script

* Include proper(?) method for obtaining event 129 scaler reads

* Ensure that trigger apparatus cut file has similar flow to stack and production to avoid confusion

* Remove reference time which serves as a reference time for the trigger apparatus

* Update maps corresponding to previous commit

* Ignore # files

* Update test stand cuts file to match production and stack

* Update test stand cuts file to match production and stack on HMS side

* Update cuts files to handle new event type stucture corresponding to mulitple triggers

* Make cuts only HMS specific

* Do the same for the SHMS and correct the template files

* Correct template files

* Add pedestal event because of historical reasons (needs to be fixed)

* Do the same for the SHMS

* Add SHMS FADC reference time signal

* Modify report files and templates to better quantify the deadtimes

* Push initial changes for Steve

* Include failed state of HMS scalers replay script

* Include proper(?) method for obtaining event 129 scaler reads

* Ensure that trigger apparatus cut file has similar flow to stack and production to avoid confusion

* Remove reference time which serves as a reference time for the trigger apparatus

* Update maps corresponding to previous commit

* Ignore # files

* Update test stand cuts file to match production and stack

* Update test stand cuts file to match production and stack on HMS side

* Add efficiency calculations for the layers of the calorimeters.

* Add efficiency calculation for the Array part of calorimeter.

* Update phgcer_calib.param

@vardant These calibration numbers should be included in hallc_replay/PARAM/SHMS/HGCER/CALIB/KPP_Spring_2017/.  For reference the gain constants for run 464 were phgcer_adc_to_npe = 1/111., 1/118., 1/122., 1/125.

* Update pcal_geom.param

Fix some typos

* First hack at setting up coincidence replay

* Add coincidence trigger map

* Update merge list for example purposes

* Add coincidence map

* Create coincidence replay script

Further modifications to the hardware scalers portion of pscalers.template to make it more more clear.

* Fix naming scheme and histo names to be consistant with the rest of the repo

* Same fix as previous commit but for HMS

* Modify production replay scripts to keep naming convention consistant with previous commits

* Apparently THaVhist cannot handle LaTeX alphabets

* Turn off tzero per wire param causing replay to crash and burn

* Uncomment event/trigger types.  Needs to be cleaned up later

* Remove deprecated detector directories

* Remove deprecated map files

* Exclude trigger histo with no real variable

* Include raster into stack map

* Uncomment lines which were causing a bajillion errors

Needs to be cleaned up at some point

* Remove deprecated parameter files

* Remove deprecated replay scripts

* Remove deprecated template file

* Re-structure the PARAM files for HMS and added raster variables to thms.param

* restructure hallc_replay DBASE for HMS param files; add hodo/cer kpp_spring_2017 calibration directories and parameter files

* restructure HMS detector maps directory; add hms run 303 to standard.database

* -added Raster to HMS trigger map
-minor fix in commented raster names
-minor fix in name for HMS to SHMS in an shms map file

* -Include only one spectrometer in 'g.evtyp' variable for HMS/SHMS report file cuts (for the moment ...)

* -added new 'PRODUCTION' directory for HMS where all def files with 'good' variables are included
-copied python script/list from SHMS 'PRODUCTION' directory to HMS.
(This script combines individual detector def files into one)

* -added STACK directory in HMS Def-files dir, which includes only stack histograms (excludes EPICS variables)

* -added TEST_STANDS directory in HMS Def-Files to include raw and good
detector histograms

* -excluded hms Aerogel from def files (for now . . .)

* -updated HMS templates for scalers, stack and production

* Re-structure the PARAM files for HMS and added raster variables to thms.param

* restructure hallc_replay DBASE for HMS param files; add hodo/cer kpp_spring_2017 calibration directories and parameter files

* restructure HMS detector maps directory; add hms run 303 to standard.database

* -added Raster to HMS trigger map
-minor fix in commented raster names
-minor fix in name for HMS to SHMS in an shms map file

* -Include only one spectrometer in 'g.evtyp' variable for HMS/SHMS report file cuts (for the moment ...)

* -added new 'PRODUCTION' directory for HMS where all def files with 'good' variables are included
-copied python script/list from SHMS 'PRODUCTION' directory to HMS.
(This script combines individual detector def files into one)

* -added STACK directory in HMS Def-files dir, which includes only stack histograms (excludes EPICS variables)

* -added TEST_STANDS directory in HMS Def-Files to include raw and good
detector histograms

* -excluded hms Aerogel from def files (for now . . .)

* -updated HMS templates for scalers, stack and production

* -Restructurization of replay scripts in HMS

* Minor fixes in shms replay scripts

* -moved replay scripts to new directories

Condensing hodoscope counts section and hodoscope rates section. Added a few comments and rearranged a few things to make things more clear.