* updated HMS map files

* minor fix in HMS maps

* updated SHMS map files

* updated coin map

* Fix typo in ptrig.map

* fix minor issue in shms maps

* Update coin.map

* Include new trigger types in the trigger apparatus

* Add new trigger types to scaler maps and database

* Include new trigger types in trigger maps

* Update scaler templates and def files

* Update maps to include new trigger types

* Set scaler event handlers to point at event 129 scaler reads

* Minor changes to pscaler cuts

Made SHMS stack map file for KPP

Made TRIG parameter file for KPP

Made replay_production_shms_kpp.C

* Minor changes to SHMS maps

* Minor changes to HMS maps

* Update merge list

* Update crate 3 map for coin

* Update coin maps

* Initial attempt at coincidence replay

* Update coin maps and replay script

* Update SHMS maps with FADC reference times

* Same for HMS

* Add FADC reference times to coin maps

* ignor nfs temp files

* Minor changes to SHMS maps

* Minor changes to HMS maps

* Update merge list

* Update crate 3 map for coin

* Update coin maps

* Initial attempt at coincidence replay

* Update coin maps and replay script

Update HMS and TRIG parameters for ADC reference time

Update TRIG histo def files.

Add new map reference times
Add paramters for adc_tdc_offset

* Fix hodoscope reference time

* Change window size and color for online SHMS config files

* Change online HMS config window sizes and color

* Fix typo

1. cratemap added tdc in slot 2 .
2. Copied old cratemaps to KPP_spring_2017
3. DC map updated for 12 GeV chamber hdc.map and hdc_htrig.map
4. Add perl scripts under make_dc_maps for making map files
5. Updated hdc_histos.def

* Overwrite scaler chan name with Empty if description is "Empty".

* Update scaler.map
  More complete implementation of user pages
  Correct the SHMS S2Y mapping

* Make make_scaler_db.py have unix format rather than DOS format

* Generate special lines for Charge, Current and Time in scaler configs

* Accomadate extra "page" column in scaler.map
  in make_scaler_db.py conversion script

* Add extra "page" column to scaler.map for new xscaler
  (And remove underscore in SHMS HODO EDTM description)

* Include trigger apparatus reference time into param list

* Inlcude trigger apparatus reference times into trigger maps

* Update HMS maps accordingly

* Update SHMS maps accordingly

* Add SHMS FADC reference time signal

* Modify report files and templates to better quantify the deadtimes

* Push initial changes for Steve

* Include failed state of HMS scalers replay script

* Include proper(?) method for obtaining event 129 scaler reads

* Ensure that trigger apparatus cut file has similar flow to stack and production to avoid confusion

* Remove reference time which serves as a reference time for the trigger apparatus

* Update maps corresponding to previous commit

* Ignore # files

* Update test stand cuts file to match production and stack

* Update test stand cuts file to match production and stack on HMS side

* Include consolidated SHMS TI trigger inputs into HMS trigger maps

* Include SHMS TI trigger inputs into HMS test stand maps

* Include consolidated HMS TI trigger inputs into SHMS trigger maps

* Include HMS TI trigger inputs into SHMS test stand maps

* Point HMS DC test stand to 6 GeV chamber histos

* Update scaler map and database to include mixed HMS and SHMS triggers

* Add ignore stuff

* Include TI trigger inputs into scalers

* Add TI trigger inputs to param files

* Add TI trigger inputs to trigger maps

* Add HMS trigger apparatus variables to trigger test stand

* Remove raster from trigger apparatus map

Update HMS maps to include new TI trigger inputs

* Remove fast raster from trigger apparatus map

* Add TI trigger inputs to SHMS maps

* added HODO EDTM to Maps and Param filrs for HMS/SHMS; Added block T.hms.* in epics_short.def in order to produce HMS Hodo EDTM leaf variable; Added Hodo EDTM to scaler.map

* undo changes in HMS hodo naming schemes for scalers map

* First hack at setting up coincidence replay

* Add coincidence trigger map

* Update merge list for example purposes

* Add coincidence map

* Create coincidence replay script

* Ignor header file

* Fix typo in map file and get rid of debug statement

* Adapt shms scaler online GUI for new naming scheme

* Remove deprecated config files

Move scaler config files to own directory

* Fix scalers replay script so it does not seg fault

* Modify online GUI for HMS scalers to function with new naming scheme

* Auto-indent

* Move staggaling files to examples

* Add directory structure to online GUI

* Fix naming scheme and histo names to be consistant with the rest of the repo

* Same fix as previous commit but for HMS

* Modify production replay scripts to keep naming convention consistant with previous commits

* Apparently THaVhist cannot handle LaTeX alphabets

* Turn off tzero per wire param causing replay to crash and burn

* Uncomment event/trigger types.  Needs to be cleaned up later

* Remove deprecated detector directories

* Remove deprecated map files

* Exclude trigger histo with no real variable

* Include raster into stack map

* Uncomment lines which were causing a bajillion errors

Needs to be cleaned up at some point

* Remove deprecated parameter files

* Remove deprecated replay scripts

* Remove deprecated template file

* Re-structure the PARAM files for HMS and added raster variables to thms.param

* restructure hallc_replay DBASE for HMS param files; add hodo/cer kpp_spring_2017 calibration directories and parameter files

* restructure HMS detector maps directory; add hms run 303 to standard.database

* -added Raster to HMS trigger map
-minor fix in commented raster names
-minor fix in name for HMS to SHMS in an shms map file

* -Include only one spectrometer in 'g.evtyp' variable for HMS/SHMS report file cuts (for the moment ...)

* -added new 'PRODUCTION' directory for HMS where all def files with 'good' variables are included
-copied python script/list from SHMS 'PRODUCTION' directory to HMS.
(This script combines individual detector def files into one)

* -added STACK directory in HMS Def-files dir, which includes only stack histograms (excludes EPICS variables)

* -added TEST_STANDS directory in HMS Def-Files to include raw and good
detector histograms

* -excluded hms Aerogel from def files (for now . . .)

* -updated HMS templates for scalers, stack and production

* Re-structure the PARAM files for HMS and added raster variables to thms.param

* restructure hallc_replay DBASE for HMS param files; add hodo/cer kpp_spring_2017 calibration directories and parameter files

* restructure HMS detector maps directory; add hms run 303 to standard.database

* -added Raster to HMS trigger map
-minor fix in commented raster names
-minor fix in name for HMS to SHMS in an shms map file

* -Include only one spectrometer in 'g.evtyp' variable for HMS/SHMS report file cuts (for the moment ...)

* -added new 'PRODUCTION' directory for HMS where all def files with 'good' variables are included
-copied python script/list from SHMS 'PRODUCTION' directory to HMS.
(This script combines individual detector def files into one)

* -added STACK directory in HMS Def-files dir, which includes only stack histograms (excludes EPICS variables)

* -added TEST_STANDS directory in HMS Def-Files to include raw and good
detector histograms

* -excluded hms Aerogel from def files (for now . . .)

* -updated HMS templates for scalers, stack and production

* -Restructurization of replay scripts in HMS

* Minor fixes in shms replay scripts

* -moved replay scripts to new directories

* Modify naming scheme and aesthetic chaqnges to map

* Move scaler map file and modify naming scheme

* Remove deprecated data base files and relocate them

* Remove depreacted scaler map files in MAPS directory

* Add symbolic links to scaler database files

* Modify scaler prefixes

* Modify templates to utilize new naming convention

* Rename directories to be consistent with previous framework

* Make directory names consistent

* Add directory stucture for report outputs

* Add directory structure for templates

* Add directory structure to SCRIPTS directory

* Remove templates from old directory stucture

* Create SHMS EPICS directory

* Configure stack and scaler replay

Add directroy structure to scripts directory

* Add directories for stack and scalers for report output

* Modify locations of replay scripts, def-files, and templates

* Incoporate fast raster into trigger apparatus and stack map

* Add directory structure to maps

Reconfigure test stand scripts to point to new map loactions

* Add fast raster histograms and aesthetic changes

* Tweak stack & all DEF-files

Rename cut files

Configure separate replay scripts

* Remove REPORT_OUTPUT directory from framework since this file should be sym linked to the RAID disk

* Uncomment histos

* Re-work DEF-file directory structure so that one DEF-file exists for each stack component

Include python script to cat individual DEF-files into single DEF-file

* Macro to determine the wire efficiencies per wire

* parameter file to be used with wire_efficiency.C macro

* Modified HMS DC WireMap

* modify wiremap in hdc.map file

* created combined map files

* Delete wire_efficiency.C

* Delete hms_dc.param

When comparing to the 6 GeV maps found mistakes in HMS cable
map for 1U1 wires 1-14, 1V1 wires 1-14, 1Y2 wires 40-52
2U1 wires 1-14 and 2V1 wires 1-14.
Needed an offset of 2 channels.

In SHMS trig map SLOT=19 set chan 31 to be the reference time for the module
In HMS trig map SLOT2 seet chan 6 to be the reference time for the module
Add parameter t_hms_tdcoffset and t_hms_tdcchanperns to thms.param
Add parameter t_shms_tdcoffset and t_shms_tdcchanperns to tshms.param
Change hcosmicflag=0 for hhodo.param
As an example of trigger plots add histograms to hstackana_report.def and pstatckana_report.def

The heavy gas and noble gas signals were mislabled at the FADC.
Decided to change map and leave cables in place.

Made replay_hms_report.C which expands on replay_hms.C
Need to create REPORT_OUTPUT directory