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Commit c30f9c68 authored by xfzhao's avatar xfzhao Committed by Adam J. Stewart
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update bbmap (#12721)

* update bbmap

* remove one extra comment line
parent 62f0286f
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...@@ -10,11 +10,16 @@ class Bbmap(Package): ...@@ -10,11 +10,16 @@ class Bbmap(Package):
"""Short read aligner for DNA and RNA-seq data.""" """Short read aligner for DNA and RNA-seq data."""
homepage = "http://sourceforge.net/projects/bbmap/" homepage = "http://sourceforge.net/projects/bbmap/"
url = "https://downloads.sourceforge.net/project/bbmap/BBMap_37.36.tar.gz" url = "https://downloads.sourceforge.net/project/bbmap/BBMap_38.63.tar.gz"
version('38.63', sha256='089064104526c8d696164aefa067f935b888bc71ef95527c72a98c17ee90a01f')
version('37.36', '1e1086e1fae490a7d03c5a065b1c262f') version('37.36', '1e1086e1fae490a7d03c5a065b1c262f')
depends_on('java') depends_on('java')
def install(self, spec, prefix): def install(self, spec, prefix):
install_tree('.', prefix.bin) install_tree('.', prefix.bin)
def setup_environment(self, spack_env, run_env):
run_env.set('BBMAP_CONFIG', self.prefix.bin.config)
run_env.set('BBMAP_RESOURCES', self.prefix.bin.resources)
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