Merge pull request #414 from epfl-scitas/issues/trilinos_385

fix : trilinos and dependencies

var/spack/repos/builtin/packages/netcdf/package.py

 from spack import *
 
+
 class Netcdf(Package):
     """NetCDF is a set of software libraries and self-describing, machine-independent
     data formats that support the creation, access, and sharing of array-oriented
@@ -11,13 +12,15 @@ class Netcdf(Package):
     version('4.4.0', 'f01cb26a0126dd9a6224e76472d25f6c')
     version('4.3.3', '5fbd0e108a54bd82cb5702a73f56d2ae')
 
+    variant('mpi', default=True, description='Enables MPI parallelism')
     variant('fortran', default=False, description="Download and install NetCDF-Fortran")
     variant('hdf4',    default=False, description="Enable HDF4 support")
 
     # Dependencies:
     depends_on("curl")  # required for DAP support
     depends_on("hdf", when='+hdf4')
-    depends_on("hdf5")  # required for NetCDF-4 support
+    depends_on("hdf5+mpi~cxx", when='+mpi')  # required for NetCDF-4 support
+    depends_on("hdf5~mpi", when='~mpi')  # required for NetCDF-4 support
     depends_on("zlib")  # required for NetCDF-4 support
 
     def install(self, spec, prefix):
@@ -41,6 +44,9 @@ def install(self, spec, prefix):
             "--enable-dap"
         ]
 
+        if '+mpi' in spec:
+            config_args.append('--enable-parallel4')
+
         CPPFLAGS.append("-I%s/include" % spec['hdf5'].prefix)
         LDFLAGS.append( "-L%s/lib"     % spec['hdf5'].prefix)
 

var/spack/repos/builtin/packages/openssl/package.py

@@ -10,6 +10,7 @@ class Openssl(Package):
     url      = "http://www.openssl.org/source/openssl-1.0.1h.tar.gz"
 
     version('1.0.1h', '8d6d684a9430d5cc98a62a5d8fbda8cf')
+    version('1.0.1r', '1abd905e079542ccae948af37e393d28')
     version('1.0.2d', '38dd619b2e77cbac69b99f52a053d25a')
     version('1.0.2e', '5262bfa25b60ed9de9f28d5d52d77fc5')
     version('1.0.2f', 'b3bf73f507172be9292ea2a8c28b659d')

var/spack/repos/builtin/packages/trilinos/package.py

@@ -10,40 +10,44 @@ class Trilinos(Package):
     homepage = "https://trilinos.org/"
     url = "http://trilinos.csbsju.edu/download/files/trilinos-12.2.1-Source.tar.gz"
 
+    version('12.4.2', '7c830f7f0f68b8ad324690603baf404e')
     version('12.2.1', '6161926ea247863c690e927687f83be9')
     version('12.0.1', 'bd99741d047471e127b8296b2ec08017')
     version('11.14.3', '2f4f83f8333e4233c57d0f01c4b57426')
     version('11.14.2', 'a43590cf896c677890d75bfe75bc6254')
     version('11.14.1', '40febc57f76668be8b6a77b7607bb67f')
 
-    variant('mpi', default=True, description='Add a dependency on MPI and enables MPI dependent packages')
+    variant('shared', default=True, description='Enables the build of shared libraries')
+    variant('debug', default=False, description='Builds a debug version of the libraries')
 
     # Everything should be compiled with -fpic
     depends_on('blas')
     depends_on('lapack')
     depends_on('boost')
-    depends_on('netcdf')
     depends_on('matio')
     depends_on('glm')
     depends_on('swig')
-    depends_on('mpi', when='+mpi')
 
-    def install(self, spec, prefix):
+    # MPI related dependencies
+    depends_on('mpi')
+    depends_on('netcdf+mpi')
+
+    depends_on('python') #  Needs py-numpy activated
 
-        options = [
-            '-DTrilinos_ENABLE_ALL_PACKAGES:BOOL=ON',
-            '-DTrilinos_ENABLE_TESTS:BOOL=OFF',
-            '-DTrilinos_ENABLE_EXAMPLES:BOOL=OFF',
-            '-DBUILD_SHARED_LIBS:BOOL=ON',
-            '-DBLAS_LIBRARY_DIRS:PATH=%s' % spec['blas'].prefix,
-            '-DLAPACK_LIBRARY_DIRS:PATH=%s' % spec['lapack'].prefix
-        ]
-        if '+mpi' in spec:
-            mpi_options = ['-DTPL_ENABLE_MPI:BOOL=ON']
-            options.extend(mpi_options)
-
-        # -DCMAKE_INSTALL_PREFIX and all the likes...
+    def install(self, spec, prefix):
+        options = []
         options.extend(std_cmake_args)
+
+        options.extend(['-DTrilinos_ENABLE_ALL_PACKAGES:BOOL=ON',
+                        '-DTrilinos_ENABLE_TESTS:BOOL=OFF',
+                        '-DTrilinos_ENABLE_EXAMPLES:BOOL=OFF',
+                        '-DCMAKE_BUILD_TYPE:STRING=%s' % ('Debug' if '+debug' in spec else 'Release'),
+                        '-DBUILD_SHARED_LIBS:BOOL=%s' % ('ON' if '+shared' in spec else 'OFF'),
+                        '-DTPL_ENABLE_MPI:STRING=ON',
+                        '-DBLAS_LIBRARY_DIRS:PATH=%s' % spec['blas'].prefix,
+                        '-DLAPACK_LIBRARY_DIRS:PATH=%s' % spec['lapack'].prefix
+                        ])
+
         with working_dir('spack-build', create=True):
             cmake('..', *options)
             make()