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eic_tools
Spack
Commits
6fb30acb
Unverified
Commit
6fb30acb
authored
4 years ago
by
Harsh Bhatia
Committed by
GitHub
4 years ago
Browse files
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Plain Diff
dssp: new package at v3.1.4 (#17188)
Renamed xspp to hspp
parent
01dc8d6f
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var/spack/repos/builtin/packages/dssp/package.py
+32
-0
32 additions, 0 deletions
var/spack/repos/builtin/packages/dssp/package.py
var/spack/repos/builtin/packages/hssp/package.py
+10
-5
10 additions, 5 deletions
var/spack/repos/builtin/packages/hssp/package.py
with
42 additions
and
5 deletions
var/spack/repos/builtin/packages/dssp/package.py
0 → 100644
+
32
−
0
View file @
6fb30acb
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from
spack
import
*
class
Dssp
(
AutotoolsPackage
):
"""'
mkdssp
'
utility. (dictionary of protein secondary structure)
"""
homepage
=
"
https://github.com/cmbi/dssp
"
url
=
"
https://github.com/cmbi/dssp/archive/3.1.4.tar.gz
"
version
(
'
3.1.4
'
,
sha256
=
'
496282b4b5defc55d111190ab9f1b615a9574a2f090e7cf5444521c747b272d4
'
)
version
(
'
2.3.0
'
,
sha256
=
'
4c95976d86dc64949cb0807fbd58c7bee5393df0001999405863dc90f05846c6
'
)
depends_on
(
'
autoconf
'
,
type
=
'
build
'
)
depends_on
(
'
automake
'
,
type
=
'
build
'
)
depends_on
(
'
libtool
'
,
type
=
'
build
'
)
depends_on
(
'
m4
'
,
type
=
'
build
'
)
depends_on
(
'
boost@1.48:
'
)
def
configure_args
(
self
):
args
=
[
"
--with-boost=%s
"
%
self
.
spec
[
'
boost
'
].
prefix
]
return
args
@run_after
(
'
configure
'
)
def
edit
(
self
):
makefile
=
FileFilter
(
join_path
(
self
.
stage
.
source_path
,
'
Makefile
'
))
makefile
.
filter
(
'
.*-Werror .*
'
,
'
-Wno-error
\\
'
)
This diff is collapsed.
Click to expand it.
var/spack/repos/builtin/packages/
x
ssp/package.py
→
var/spack/repos/builtin/packages/
h
ssp/package.py
+
10
−
5
View file @
6fb30acb
...
...
@@ -6,12 +6,17 @@
from
spack
import
*
class
X
ssp
(
AutotoolsPackage
):
"""
The source code for building the mk
dssp, mkhssp, hsspconv, and hsspsoap
programs is bundled
in the
x
ssp project
"""
class
H
ssp
(
AutotoolsPackage
):
"""
The source code for building the mk
hssp and hsspconv programs is bundled
in the
h
ssp project
.
homepage
=
"
https://github.com/cmbi/xssp
"
url
=
"
https://github.com/cmbi/xssp/archive/3.0.10.tar.gz
"
The mkhssp executable creates stockholm files with hssp annotations in
them. The hsspconv executable converts stockholm to the original hssp
format.
"""
homepage
=
"
https://github.com/cmbi/hssp
"
url
=
"
https://github.com/cmbi/hssp/archive/3.0.10.tar.gz
"
version
(
'
3.0.10
'
,
sha256
=
'
b475d6fa62098df0e54c8dbdaa0b32de93bf5a393335f73f9b5a7e95f3090d2a
'
)
version
(
'
3.0.9
'
,
sha256
=
'
42a9a93c48d22478212dcaf6ceb3feb64443e4cb2e8cccdd402b47a595d16658
'
)
...
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