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containers
eic_container
Commits
132d898d
Commit
132d898d
authored
2 years ago
by
Wouter Deconinck
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fix: rm unneeded source spack/setup-env.sh
parent
bdba99f7
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1 merge request
!567
fix: rm unneeded source spack/setup-env.sh
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containers/jug/dev.Dockerfile
+19
-32
19 additions, 32 deletions
containers/jug/dev.Dockerfile
with
19 additions
and
32 deletions
containers/jug/dev.Dockerfile
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19
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32
View file @
132d898d
...
@@ -24,7 +24,6 @@ RUN --mount=type=cache,target=/var/cache/apt,sharing=locked,id=${TARGETPLATFORM}
...
@@ -24,7 +24,6 @@ RUN --mount=type=cache,target=/var/cache/apt,sharing=locked,id=${TARGETPLATFORM}
&&
rm
-rf
/var/lib/apt/lists/
*
&&
rm
-rf
/var/lib/apt/lists/
*
## Setup spack
## Setup spack
## parts:
ENV
SPACK_ROOT=/opt/spack
ENV
SPACK_ROOT=/opt/spack
ARG
SPACK_ORGREPO="spack/spack"
ARG
SPACK_ORGREPO="spack/spack"
ARG
SPACK_VERSION="develop"
ARG
SPACK_VERSION="develop"
...
@@ -36,11 +35,11 @@ RUN git clone https://github.com/${SPACK_ORGREPO}.git ${SPACK_ROOT} \
...
@@ -36,11 +35,11 @@ RUN git clone https://github.com/${SPACK_ORGREPO}.git ${SPACK_ROOT} \
git
-C
${
SPACK_ROOT
}
cherry-pick
-n
${
SPACK_CHERRYPICKS
}
;
\
git
-C
${
SPACK_ROOT
}
cherry-pick
-n
${
SPACK_CHERRYPICKS
}
;
\
fi
\
fi
\
&&
ln
-s
$SPACK_ROOT
/share/spack/docker/entrypoint.bash
\
&&
ln
-s
$SPACK_ROOT
/share/spack/docker/entrypoint.bash
\
/usr/
s
bin/docker-shell
\
/usr/bin/docker-shell
\
&&
ln
-s
$SPACK_ROOT
/share/spack/docker/entrypoint.bash
\
&&
ln
-s
$SPACK_ROOT
/share/spack/docker/entrypoint.bash
\
/usr/
s
bin/interactive-shell
\
/usr/bin/interactive-shell
\
&&
ln
-s
$SPACK_ROOT
/share/spack/docker/entrypoint.bash
\
&&
ln
-s
$SPACK_ROOT
/share/spack/docker/entrypoint.bash
\
/usr/
s
bin/spack-env
/usr/bin/spack-env
SHELL
["docker-shell"]
SHELL
["docker-shell"]
...
@@ -60,12 +59,9 @@ RUN declare -A arch=( \
...
@@ -60,12 +59,9 @@ RUN declare -A arch=( \
&&
spack compiler find
--scope
site
\
&&
spack compiler find
--scope
site
\
&&
spack config blame compilers
&&
spack config blame compilers
## Setup spack buildcache mirrors, including an internal
## Setup spack buildcache mirrors
## spack mirror using the docker build cache, and
## a backup mirror on the internal B010 network
RUN
--mount
=
type
=
cache,target
=
/var/cache/spack-mirror
\
RUN
--mount
=
type
=
cache,target
=
/var/cache/spack-mirror
\
export
PATH
=
$PATH
:
$SPACK_ROOT
/bin
\
spack mirror add docker /var/cache/spack-mirror
\
&&
spack mirror add docker /var/cache/spack-mirror
\
&&
spack buildcache update-index
-d
/var/cache/spack-mirror
\
&&
spack buildcache update-index
-d
/var/cache/spack-mirror
\
&&
spack mirror list
&&
spack mirror list
...
@@ -75,8 +71,7 @@ RUN --mount=type=cache,target=/var/cache/spack-mirror \
...
@@ -75,8 +71,7 @@ RUN --mount=type=cache,target=/var/cache/spack-mirror \
ARG
S3_ACCESS_KEY=""
ARG
S3_ACCESS_KEY=""
ARG
S3_SECRET_KEY=""
ARG
S3_SECRET_KEY=""
RUN
--mount
=
type
=
cache,target
=
/var/cache/spack-mirror
\
RUN
--mount
=
type
=
cache,target
=
/var/cache/spack-mirror
\
export
PATH
=
$PATH
:
$SPACK_ROOT
/bin
\
if
[
-n
"
${
S3_ACCESS_KEY
}
"
]
;
then
\
&&
if
[
-n
"
${
S3_ACCESS_KEY
}
"
]
;
then
\
spack mirror add
--scope
site
\
spack mirror add
--scope
site
\
--s3-endpoint-url
https://eics3.sdcc.bnl.gov:9000
\
--s3-endpoint-url
https://eics3.sdcc.bnl.gov:9000
\
--s3-access-key-id
"
${
S3_ACCESS_KEY
}
"
\
--s3-access-key-id
"
${
S3_ACCESS_KEY
}
"
\
...
@@ -106,21 +101,20 @@ RUN git clone https://github.com/${EICSPACK_ORGREPO}.git ${EICSPACK_ROOT} \
...
@@ -106,21 +101,20 @@ RUN git clone https://github.com/${EICSPACK_ORGREPO}.git ${EICSPACK_ROOT} \
## Setup our custom environment (secret mount for write-enabled mirror)
## Setup our custom environment (secret mount for write-enabled mirror)
COPY
--from=spack spack-environment/ /opt/spack-environment/
COPY
--from=spack spack-environment/ /opt/spack-environment/
ARG
ENV=dev
ARG
ENV=dev
ENV
SPACK_ENV=/opt/spack-environment/${ENV}
RUN
--mount
=
type
=
cache,target
=
/var/cache/spack-mirror,sharing
=
locked
\
RUN
--mount
=
type
=
cache,target
=
/var/cache/spack-mirror,sharing
=
locked
\
--mount
=
type
=
secret,id
=
mirrors,target
=
/opt/spack/etc/spack/mirrors.yaml
\
--mount
=
type
=
secret,id
=
mirrors,target
=
/opt/spack/etc/spack/mirrors.yaml
\
cd
/opt/spack-environment
\
source
$SPACK_ROOT
/share/spack/setup-env.sh
\
&&
source
$SPACK_ROOT
/share/spack/setup-env.sh
\
&&
spack
env
activate
--dir
${
SPACK_ENV
}
\
&&
spack
env
activate
--dir
/opt/spack-environment/
${
ENV
}
\
&&
make
--jobs
${
jobs
}
--keep-going
--directory
/opt/spack-environment
\
&&
make
--jobs
${
jobs
}
--keep-going
--directory
/opt/spack-environment
\
SPACK_ENV
=
${
ENV
}
\
SPACK_ENV
=
${
SPACK_ENV
}
\
BUILDCACHE_DIR
=
/var/cache/spack-mirror
\
BUILDCACHE_DIR
=
/var/cache/spack-mirror
\
BUILDCACHE_MIRROR
=
eic-spack
BUILDCACHE_MIRROR
=
eic-spack
## Create view at /usr/local
## Create view at /usr/local
RUN
--mount
=
type
=
cache,target
=
/var/cache/spack-mirror,sharing
=
locked
\
RUN
--mount
=
type
=
cache,target
=
/var/cache/spack-mirror,sharing
=
locked
\
cd
/opt/spack-environment
\
source
$SPACK_ROOT
/share/spack/setup-env.sh
\
&&
source
$SPACK_ROOT
/share/spack/setup-env.sh
\
&&
spack
env
activate
--dir
${
SPACK_ENV
}
\
&&
spack
env
activate
--dir
/opt/spack-environment/
${
ENV
}
\
&&
rm
-r
/usr/local
\
&&
rm
-r
/usr/local
\
&&
spack
env
view
enable
/usr/local
&&
spack
env
view
enable
/usr/local
...
@@ -136,9 +130,8 @@ RUN --mount=type=cache,target=/var/cache/spack-mirror,sharing=locked \
...
@@ -136,9 +130,8 @@ RUN --mount=type=cache,target=/var/cache/spack-mirror,sharing=locked \
COPY
requirements.txt /usr/local/etc/requirements.txt
COPY
requirements.txt /usr/local/etc/requirements.txt
RUN
--mount
=
type
=
cache,target
=
/var/cache/pip,sharing
=
locked,id
=
${
TARGETPLATFORM
}
\
RUN
--mount
=
type
=
cache,target
=
/var/cache/pip,sharing
=
locked,id
=
${
TARGETPLATFORM
}
\
echo
"Installing additional python packages"
\
echo
"Installing additional python packages"
\
&&
cd
/opt/spack-environment
\
&&
source
$SPACK_ROOT
/share/spack/setup-env.sh
\
&&
source
$SPACK_ROOT
/share/spack/setup-env.sh
\
&&
spack
env
activate
--dir
/opt/spack-environment/
${
ENV
}
\
&&
spack
env
activate
--dir
${
SPACK_ENV
}
\
&&
python
-m
pip
install
\
&&
python
-m
pip
install
\
--trusted-host
pypi.org
\
--trusted-host
pypi.org
\
--trusted-host
files.pythonhosted.org
\
--trusted-host
files.pythonhosted.org
\
...
@@ -148,10 +141,8 @@ RUN --mount=type=cache,target=/var/cache/pip,sharing=locked,id=${TARGETPLATFORM}
...
@@ -148,10 +141,8 @@ RUN --mount=type=cache,target=/var/cache/pip,sharing=locked,id=${TARGETPLATFORM}
# ^ Supress not on PATH Warnings
# ^ Supress not on PATH Warnings
## Including some small fixes
## Including some small fixes
RUN
cd
/opt/spack-environment
\
RUN
echo
"Grabbing environment info"
\
&&
source
$SPACK_ROOT
/share/spack/setup-env.sh
\
&&
spack
env
activate
--sh
--dir
${
SPACK_ENV
}
\
&&
echo
"Grabbing environment info"
\
&&
spack
env
activate
--sh
--dir
/opt/spack-environment/
${
ENV
}
\
>
/etc/profile.d/z10_spack_environment.sh
>
/etc/profile.d/z10_spack_environment.sh
## make sure we have the entrypoints setup correctly
## make sure we have the entrypoints setup correctly
...
@@ -166,16 +157,12 @@ WORKDIR /
...
@@ -166,16 +157,12 @@ WORKDIR /
FROM
builder
as
staging
FROM
builder
as
staging
# Garbage collect in environment
# Garbage collect in environment
RUN
cd
/opt/spack-environment
\
RUN
spack
-e
${
SPACK_ENV
}
gc
-y
&&
source
$SPACK_ROOT
/share/spack/setup-env.sh
\
&&
spack
env
activate
--dir
/opt/spack-environment/
${
ENV
}
\
&&
spack gc
-y
# Garbage collect in git
# Garbage collect in git
RUN
cd
$SPACK_ROOT
\
RUN
du
-sh
$SPACK_ROOT
\
&&
du
-sh
$SPACK_ROOT
\
&&
git
-C
$SPACK_ROOT
fetch
--depth
=
1
\
&&
git fetch
--depth
=
1
\
&&
git
-C
$SPACK_ROOT
gc
--prune
=
all
--aggressive
\
&&
git gc
--prune
=
all
--aggressive
\
&&
du
-sh
$SPACK_ROOT
&&
du
-sh
$SPACK_ROOT
## Bugfix to address issues loading the Qt5 libraries on Linux kernels prior to 3.15
## Bugfix to address issues loading the Qt5 libraries on Linux kernels prior to 3.15
...
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