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feat: remove S3 transfers from job (simpler is better)

Wouter Deconinck requested to merge remove-s3-from-job into main
  • remove S3 transfers into and out of job (require scheduler to do this)
    • remove tests that relied on this
  • zero-based task counting (i.e. first file chunk is 0)
    • change tests that used first file chunk as 1
  • task tag is literal, not modified
  • no more RECONSTRUCTION variable

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