Edit .gitlab-ci.yml

.gitlab-ci.yml

@@ -79,8 +79,8 @@ common:setup:
       mount
       if [ -n "${RM}" ] ; then rm -rf $RM ; fi
       for file in $(find /scratch/snakemake-cache -type f); do
-        if file -b "$file" | grep -E '^ROOT file'; then
-          rootls "$file" 2>/dev/null || echo "$file is broken" 
+        if file -b "$file" | grep -E '^ROOT file' >/dev/null; then
+          rootls "$file" 2>/dev/null && echo "$file is not broken" || echo "$file is broken" 
         fi
       done
       find `realpath /scratch` -type l -print0 | (du -sL --files0-from=- || true) | sort -n > /tmp/df