Cleaned up documentation

• Fixed warnings for different section levels

• put all detectors in subdirectory.

  new file: .gitignore new file: InputEvents.rst modified: contents.rst renamed: Calorimeters.rst -> detectors/Calorimeters.rst renamed: EMCalorimeterSoLID.rst -> detectors/EMCalorimeterSoLID.rst renamed: RomanPot.rst -> detectors/RomanPot.rst new file: detectors/Trackers.rst renamed: detectors.rst -> detectors/detectors.rst

docs/detectors/Calorimeters.rst

-********************
+************
 Calorimeters
-********************
+************
 
 Crystal Calorimeters
 ####################
@@ -8,23 +8,24 @@ Crystal Calorimeters
 For the backward electron direction
 ***********************************
 
-From Tanja Horn's talk at 1st EIC Yellow Report Workshop at Temple University. The title of talk is Electromagnetic calorimetry technologies for EIC. The `presentation file <https://indico.bnl.gov/event/7449/contributions/35966/attachments/27177/41430/EIC-DWG-Calo-03192020.pdf>`_ can be found (Page 4 Electron Endcap EMCAL).
+From Tanja Horn's talk at 1st EIC Yellow Report Workshop at Temple University. The title of talk is Electromagnetic calorimetry technologies for EIC. The 
+`presentation file <https://indico.bnl.gov/event/7449/contributions/35966/attachments/27177/41430/EIC-DWG-Calo-03192020.pdf>`_ can be found (Page 4 Electron Endcap EMCAL).
 
 * Homogeneous calorimetry (inner part)
 
-  #. PbWO4 (12cam < R < 60 cm)
+  #. PbWO4 :math:`(12\mathrm{cm} < R < 60 \mathrm{cm})` 
 
-  #. Dimension: 2x2x20 cm3
+  #. Dimension: :math:`2\times 2 \times 20 \mathrm{cm}^3`
 
-  #. Performance: ~2%/sqrt(E)+0.7%
+  #. Performance: :math:`\sim 2\%/\sqrt(E)+0.7\%`
 
   #. Estimated # of blocks for EIC: 2500
 
 * Implemeted in
 
-  #. ~/NPDet/src/GenericDetectors/calorimeters/compact/CrystalEndcapECAL_example.xml
+  #. GenericDetectors/calorimeters/compact/CrystalEndcapECAL_example.xml 
 
-  #. ~/NPDet/src/GenericDetectors/calorimeters/src/CrystalEndcapECAL_geo.cpp
+  #. `GenericDetectors/calorimeters/src/CrystalEndcapECAL_geo.cpp <https://argonne_mep.gitlab.io/eic/NPDet/group___crystal_endcap_e_c_a_l.html>`_
 
 Zero Degree Calorimeters
 ########################
@@ -32,7 +33,9 @@ Zero Degree Calorimeters
 For neutrons and photons
 ************************
 
-Form Yuji Goto (RIKEN)'s talk at 1st EIC Yellow Report Workshop at Temple University. The title of talk is Zero Degree Calorimetry. The `presentation file <https://indico.bnl.gov/event/7449/contributions/35872/attachments/27171/41417/YRWS_2003.pdf>`_ can be found.
+Form Yuji Goto (RIKEN)'s talk at 1st EIC Yellow Report Workshop at Temple University. 
+The title of talk is Zero Degree Calorimetry. 
+The `presentation <https://indico.bnl.gov/event/7449/contributions/35872/attachments/27171/41417/YRWS_2003.pdf>`_ can be found.
 
 Detector configuration of RHICf detector
 ========================================
@@ -40,12 +43,12 @@ Detector configuration of RHICf detector
 * Scintillator (Blue)
 * Scintillator position (Red)
 
-.. image:: images/ZDC.png
+.. image:: ../images/ZDC.png
    :width: 500px
 
 Longitudinal structure
 ======================
-.. image:: images/Longitudinal_structure_of_ZDC_detector.png
+.. image:: ../images/Longitudinal_structure_of_ZDC_detector.png
    :width: 500px
 
 Detector Description
@@ -166,3 +169,4 @@ Access Variables
   };
 
 
+.. include:: EMCalorimeterSoLID.rst