From ddaba07d8297544f2587f0c31fcbd2dafa824eb3 Mon Sep 17 00:00:00 2001
From: Geoffrey Oxberry <oxberry1@llnl.gov>
Date: Tue, 5 Apr 2016 19:00:28 -0700
Subject: [PATCH] metis 4.0.3
Add version 4.0.3 to metis package. Attempted to implement reasonable
versions of all variants declared for metis@5.1.0; some of these do
not have analogues in metis@4.0.3, and errors are raised accordingly.
Also updated dependencies of packages with depends_on('metis') to
depends_on('metis@5:') to ensure that these packages still build.
---
.../repos/builtin/packages/dealii/package.py | 2 +-
.../repos/builtin/packages/eigen/package.py | 2 +-
.../repos/builtin/packages/metis/package.py | 83 ++++++++++++++++++-
.../repos/builtin/packages/mumps/package.py | 2 +-
.../builtin/packages/parmetis/package.py | 2 +-
.../repos/builtin/packages/petsc/package.py | 2 +-
.../builtin/packages/superlu-dist/package.py | 2 +-
.../builtin/packages/trilinos/package.py | 2 +-
8 files changed, 86 insertions(+), 11 deletions(-)
diff --git a/var/spack/repos/builtin/packages/dealii/package.py b/var/spack/repos/builtin/packages/dealii/package.py
index 1f763ad358..b251d50ca1 100644
--- a/var/spack/repos/builtin/packages/dealii/package.py
+++ b/var/spack/repos/builtin/packages/dealii/package.py
@@ -40,7 +40,7 @@ class Dealii(Package):
depends_on ("arpack-ng+mpi", when='+arpack+mpi')
depends_on ("doxygen", when='+doc')
depends_on ("hdf5+mpi~cxx", when='+hdf5+mpi') #FIXME NetCDF declares dependency with ~cxx, why?
- depends_on ("metis", when='+metis')
+ depends_on ("metis@5:", when='+metis')
depends_on ("netcdf+mpi", when="+netcdf+mpi")
depends_on ("netcdf-cxx", when='+netcdf+mpi')
depends_on ("oce", when='+oce')
diff --git a/var/spack/repos/builtin/packages/eigen/package.py b/var/spack/repos/builtin/packages/eigen/package.py
index 8d6e672f86..1501989812 100644
--- a/var/spack/repos/builtin/packages/eigen/package.py
+++ b/var/spack/repos/builtin/packages/eigen/package.py
@@ -45,7 +45,7 @@ class Eigen(Package):
# TODO : dependency on googlehash, superlu, adolc missing
- depends_on('metis', when='+metis')
+ depends_on('metis@5:', when='+metis')
depends_on('scotch', when='+scotch')
depends_on('fftw', when='+fftw')
depends_on('suite-sparse', when='+suitesparse')
diff --git a/var/spack/repos/builtin/packages/metis/package.py b/var/spack/repos/builtin/packages/metis/package.py
index d3bab554fe..e348eca4ba 100644
--- a/var/spack/repos/builtin/packages/metis/package.py
+++ b/var/spack/repos/builtin/packages/metis/package.py
@@ -24,7 +24,7 @@
##############################################################################
from spack import *
-import glob,sys
+import glob, sys, os
class Metis(Package):
"""
@@ -37,6 +37,8 @@ class Metis(Package):
url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-5.1.0.tar.gz"
version('5.1.0', '5465e67079419a69e0116de24fce58fe')
+ version('4.0.3', '5efa35de80703c1b2c4d0de080fafbcf4e0d363a21149a1ad2f96e0144841a55',
+ url='http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/OLD/metis-4.0.3.tar.gz')
variant('shared', default=True, description='Enables the build of shared libraries')
variant('debug', default=False, description='Builds the library in debug mode')
@@ -45,12 +47,85 @@ class Metis(Package):
variant('idx64', default=False, description='Use int64_t as default index type')
variant('double', default=False, description='Use double precision floating point types')
- depends_on('cmake @2.8:') # build-time dependency
-
+ depends_on('cmake @2.8:', when='@5:') # build-time dependency
depends_on('gdb', when='+gdb')
- patch('install_gklib_defs_rename.patch')
+ patch('install_gklib_defs_rename.patch', when='@5:')
+
+
+ @when('@4:4.0.3')
+ def install(self, spec, prefix):
+ if '+gdb' in spec:
+ raise InstallError('gdb support not implemented in METIS 4!')
+ if '+idx64' in spec:
+ raise InstallError('idx64 option not implemented in METIS 4!')
+ if '+double' in spec:
+ raise InstallError('double option not implemented for METIS 4!')
+
+ options = ['COPTIONS=-fPIC']
+ if '+debug' in spec:
+ options.append('OPTFLAGS=-g -O0')
+ make(*options)
+
+ mkdir(prefix.bin)
+ for x in ('pmetis', 'kmetis', 'oemetis', 'onmetis', 'partnmesh',
+ 'partdmesh', 'mesh2nodal', 'mesh2dual', 'graphchk'):
+ install(x, prefix.bin)
+
+ mkdir(prefix.lib)
+ install('libmetis.a', prefix.lib)
+
+ mkdir(prefix.include)
+ for h in glob.glob(join_path('Lib', '*.h')):
+ install(h, prefix.include)
+
+ mkdir(prefix.share)
+ for f in (join_path(*p)
+ for p in (('Programs', 'io.c'),
+ ('Test','mtest.c'),
+ ('Graphs','4elt.graph'),
+ ('Graphs', 'metis.mesh'),
+ ('Graphs', 'test.mgraph'))):
+ install(f, prefix.share)
+
+ if '+shared' in spec:
+ if sys.platform == 'darwin':
+ lib_dsuffix = 'dylib'
+ load_flag = '-Wl,-all_load'
+ no_load_flag = ''
+ else:
+ lib_dsuffix = 'so'
+ load_flag = '-Wl,-whole-archive'
+ no_load_flag = '-Wl,-no-whole-archive'
+
+ os.system(spack_cc + ' -fPIC -shared ' + load_flag +
+ ' libmetis.a ' + no_load_flag + ' -o libmetis.' +
+ lib_dsuffix)
+ install('libmetis.' + lib_dsuffix, prefix.lib)
+
+ # Set up and run tests on installation
+ symlink(join_path(prefix.share, 'io.c'), 'io.c')
+ symlink(join_path(prefix.share, 'mtest.c'), 'mtest.c')
+ os.system(spack_cc + ' -I%s' % prefix.include + ' -c io.c')
+ os.system(spack_cc + ' -I%s' % prefix.include +
+ ' -L%s' % prefix.lib + ' -lmetis mtest.c io.o -o mtest')
+ _4eltgraph = join_path(prefix.share, '4elt.graph')
+ test_mgraph = join_path(prefix.share, 'test.mgraph')
+ metis_mesh = join_path(prefix.share, 'metis.mesh')
+ kmetis = join_path(prefix.bin, 'kmetis')
+ os.system('./mtest ' + _4eltgraph)
+ os.system(kmetis + ' ' + _4eltgraph + ' 40')
+ os.system(join_path(prefix.bin, 'onmetis') + ' ' + _4eltgraph)
+ os.system(join_path(prefix.bin, 'pmetis') + ' ' + test_mgraph + ' 2')
+ os.system(kmetis + ' ' + test_mgraph + ' 2')
+ os.system(kmetis + ' ' + test_mgraph + ' 5')
+ os.system(join_path(prefix.bin, 'partnmesh') + metis_mesh + ' 10')
+ os.system(join_path(prefix.bin, 'partdmesh') + metis_mesh + ' 10')
+ os.system(join_path(prefix.bin, 'mesh2dual') + metis_mesh)
+
+
+ @when('@5:')
def install(self, spec, prefix):
options = []
diff --git a/var/spack/repos/builtin/packages/mumps/package.py b/var/spack/repos/builtin/packages/mumps/package.py
index 025d86ebdc..58f790ec32 100644
--- a/var/spack/repos/builtin/packages/mumps/package.py
+++ b/var/spack/repos/builtin/packages/mumps/package.py
@@ -23,7 +23,7 @@ class Mumps(Package):
depends_on('scotch + esmumps', when='~ptscotch+scotch')
depends_on('scotch + esmumps + mpi', when='+ptscotch')
- depends_on('metis', when='+metis')
+ depends_on('metis@5:', when='+metis')
depends_on('parmetis', when="+parmetis")
depends_on('blas')
depends_on('lapack')
diff --git a/var/spack/repos/builtin/packages/parmetis/package.py b/var/spack/repos/builtin/packages/parmetis/package.py
index ff4370aa4b..b49f8dae00 100644
--- a/var/spack/repos/builtin/packages/parmetis/package.py
+++ b/var/spack/repos/builtin/packages/parmetis/package.py
@@ -44,7 +44,7 @@ class Parmetis(Package):
depends_on('mpi')
patch('enable_external_metis.patch')
- depends_on('metis')
+ depends_on('metis@5:')
# bug fixes from PETSc developers
# https://bitbucket.org/petsc/pkg-parmetis/commits/1c1a9fd0f408dc4d42c57f5c3ee6ace411eb222b/raw/
diff --git a/var/spack/repos/builtin/packages/petsc/package.py b/var/spack/repos/builtin/packages/petsc/package.py
index 5c1fc6cc92..1161dd7d67 100644
--- a/var/spack/repos/builtin/packages/petsc/package.py
+++ b/var/spack/repos/builtin/packages/petsc/package.py
@@ -40,7 +40,7 @@ class Petsc(Package):
# Other dependencies
depends_on('boost', when='+boost')
- depends_on('metis', when='+metis')
+ depends_on('metis@5:', when='+metis')
depends_on('hdf5+mpi', when='+hdf5+mpi')
depends_on('parmetis', when='+metis+mpi')
diff --git a/var/spack/repos/builtin/packages/superlu-dist/package.py b/var/spack/repos/builtin/packages/superlu-dist/package.py
index ddcb7f9225..5cf5e129b4 100644
--- a/var/spack/repos/builtin/packages/superlu-dist/package.py
+++ b/var/spack/repos/builtin/packages/superlu-dist/package.py
@@ -15,7 +15,7 @@ class SuperluDist(Package):
depends_on ('blas')
depends_on ('lapack')
depends_on ('parmetis')
- depends_on ('metis')
+ depends_on ('metis@5:')
def install(self, spec, prefix):
makefile_inc = []
diff --git a/var/spack/repos/builtin/packages/trilinos/package.py b/var/spack/repos/builtin/packages/trilinos/package.py
index 6223848c68..0f72055fa7 100644
--- a/var/spack/repos/builtin/packages/trilinos/package.py
+++ b/var/spack/repos/builtin/packages/trilinos/package.py
@@ -42,7 +42,7 @@ class Trilinos(Package):
depends_on('matio')
depends_on('glm')
depends_on('swig')
- depends_on('metis',when='+metis')
+ depends_on('metis@5:',when='+metis')
depends_on('suite-sparse',when='+suite-sparse')
# MPI related dependencies
--
GitLab