From b25f27d442a676cf40ddec3069ef5a37a9b9b1fa Mon Sep 17 00:00:00 2001
From: Eric <erimar77@users.noreply.github.com>
Date: Thu, 10 Jan 2019 12:28:07 -0600
Subject: [PATCH] py-checkm-genome: Add version 1.0.13 (#10304)
* py-checkm-genome: Add version 1.0.13
* py-checkm-genome: Add missing py-backports-functools-lru-cache dependency
* py-checkm-genome: Fix missing whitespace
---
.../packages/py-checkm-genome/package.py | 18 +++++++++++-------
1 file changed, 11 insertions(+), 7 deletions(-)
diff --git a/var/spack/repos/builtin/packages/py-checkm-genome/package.py b/var/spack/repos/builtin/packages/py-checkm-genome/package.py
index ea56e127c4..25e37eeeb7 100644
--- a/var/spack/repos/builtin/packages/py-checkm-genome/package.py
+++ b/var/spack/repos/builtin/packages/py-checkm-genome/package.py
@@ -13,12 +13,16 @@ class PyCheckmGenome(PythonPackage):
homepage = "https://ecogenomics.github.io/CheckM"
url = "https://pypi.io/packages/source/c/checkm-genome/checkm-genome-1.0.11.tar.gz"
+ version('1.0.13', sha256='ffb7e4966c0fac07c7e6e7db6f6eb5b48587fa83987f8a68efbaff2afb7da82e')
version('1.0.11', '3058546ec324e2420cf72f0d2576114b')
- depends_on('hmmer@3.1b1:')
- depends_on('prodigal@2.6.1:')
- depends_on('py-numpy@1.8.0:', type=('build', 'run'))
- depends_on('py-scipy@0.9.0:', type=('build', 'run'))
- depends_on('py-matplotlib@1.3.1:', type=('build', 'run'))
- depends_on('py-pysam@0.8.3:', type=('build', 'run'))
- depends_on('py-dendropy@4.0.0:', type=('build', 'run'))
+ depends_on('hmmer@3.1b1:', type=('build', 'run'))
+ depends_on('pplacer', type=('build', 'run'))
+ depends_on('prodigal@2.6.1:', type=('build', 'run'))
+ depends_on('python@2.7.0:2.7.999', type=('build', 'run'))
+ depends_on('py-backports-functools-lru-cache', type=('build', 'run'))
+ depends_on('py-numpy@1.8.0:', type=('build', 'run'))
+ depends_on('py-scipy@0.9.0:', type=('build', 'run'))
+ depends_on('py-matplotlib@1.3.1:2.2.3', type=('build', 'run'))
+ depends_on('py-pysam@0.8.3:', type=('build', 'run'))
+ depends_on('py-dendropy@4.0.0:', type=('build', 'run'))
--
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