From adda7dd84ad0b27dc936ae3d65d2a948b3c5a65b Mon Sep 17 00:00:00 2001
From: simonge <simon.gardner@glasgow.ac.uk>
Date: Wed, 4 Jun 2025 18:38:50 +0100
Subject: [PATCH] Remove other benchmarks

---
 .gitlab-ci.yml | 106 +++++++++++++++++++++++++------------------------
 Snakefile      |  84 +++++++++++++++++++--------------------
 2 files changed, 96 insertions(+), 94 deletions(-)

diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 943e1862..b76cbd01 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -124,62 +124,64 @@ get_data:
       - runner_system_failure
 
 include: 
-  - local: 'benchmarks/backgrounds/config.yml'
-  - local: 'benchmarks/backwards_ecal/config.yml'
-  - local: 'benchmarks/calo_pid/config.yml'
-  - local: 'benchmarks/ecal_gaps/config.yml'
-  - local: 'benchmarks/tracking_detectors/config.yml'
-  - local: 'benchmarks/tracking_performances/config.yml'
-  - local: 'benchmarks/tracking_performances_dis/config.yml'
-  - local: 'benchmarks/barrel_ecal/config.yml'
-  - local: 'benchmarks/barrel_hcal/config.yml'
-  - local: 'benchmarks/lfhcal/config.yml'
-  - local: 'benchmarks/zdc/config.yml'
-  - local: 'benchmarks/zdc_lyso/config.yml'
-  - local: 'benchmarks/zdc_neutron/config.yml'
-  - local: 'benchmarks/zdc_photon/config.yml'
-  - local: 'benchmarks/zdc_pi0/config.yml'
-  - local: 'benchmarks/material_scan/config.yml'
-  - local: 'benchmarks/pid/config.yml'
-  - local: 'benchmarks/timing/config.yml'
-  - local: 'benchmarks/b0_tracker/config.yml'
-  - local: 'benchmarks/insert_muon/config.yml'
-  - local: 'benchmarks/insert_tau/config.yml'
-  - local: 'benchmarks/zdc_sigma/config.yml'
-  - local: 'benchmarks/zdc_lambda/config.yml'
-  - local: 'benchmarks/insert_neutron/config.yml'
-  - local: 'benchmarks/femc_electron/config.yml'
-  - local: 'benchmarks/femc_photon/config.yml'
-  - local: 'benchmarks/femc_pi0/config.yml'
+  # - local: 'benchmarks/backgrounds/config.yml'
+  # - local: 'benchmarks/backwards_ecal/config.yml'
+  # - local: 'benchmarks/calo_pid/config.yml'
+  # - local: 'benchmarks/ecal_gaps/config.yml'
+  # - local: 'benchmarks/tracking_detectors/config.yml'
+  # - local: 'benchmarks/tracking_performances/config.yml'
+  # - local: 'benchmarks/tracking_performances_dis/config.yml'
+  # - local: 'benchmarks/barrel_ecal/config.yml'
+  # - local: 'benchmarks/barrel_hcal/config.yml'
+  # - local: 'benchmarks/lfhcal/config.yml'
+  # - local: 'benchmarks/zdc/config.yml'
+  # - local: 'benchmarks/zdc_lyso/config.yml'
+  # - local: 'benchmarks/zdc_neutron/config.yml'
+  # - local: 'benchmarks/zdc_photon/config.yml'
+  # - local: 'benchmarks/zdc_pi0/config.yml'
+  # - local: 'benchmarks/material_scan/config.yml'
+  # - local: 'benchmarks/pid/config.yml'
+  # - local: 'benchmarks/timing/config.yml'
+  # - local: 'benchmarks/b0_tracker/config.yml'
+  # - local: 'benchmarks/insert_muon/config.yml'
+  # - local: 'benchmarks/insert_tau/config.yml'
+  # - local: 'benchmarks/zdc_sigma/config.yml'
+  # - local: 'benchmarks/zdc_lambda/config.yml'
+  # - local: 'benchmarks/insert_neutron/config.yml'
+  # - local: 'benchmarks/femc_electron/config.yml'
+  # - local: 'benchmarks/femc_photon/config.yml'
+  # - local: 'benchmarks/femc_pi0/config.yml'
+  - local: 'benchmarks/beamline/config.yml'
 deploy_results:
   allow_failure: true
   stage: deploy
   needs:
-    - "collect_results:backgrounds"
-    - "collect_results:backwards_ecal"
-    - "collect_results:barrel_ecal"
-    - "collect_results:barrel_hcal"
-    - "collect_results:calo_pid"
-    - "collect_results:ecal_gaps"
-    - "collect_results:lfhcal"
-    - "collect_results:material_scan"
-    - "collect_results:pid"
-    - "collect_results:tracking_performance"
-    - "collect_results:tracking_performance_campaigns"
-    - "collect_results:zdc_sigma"
-    - "collect_results:zdc_lambda"
-    - "collect_results:insert_neutron"
-    - "collect_results:tracking_performances_dis"
-    - "collect_results:zdc"
-    - "collect_results:zdc_lyso"
-    - "collect_results:zdc_neutron"
-    - "collect_results:insert_muon"
-    - "collect_results:insert_tau"
-    - "collect_results:zdc_photon"
-    - "collect_results:zdc_pi0"
-    - "collect_results:femc_electron"
-    - "collect_results:femc_photon"
-    - "collect_results:femc_pi0"
+    # - "collect_results:backgrounds"
+    # - "collect_results:backwards_ecal"
+    # - "collect_results:barrel_ecal"
+    # - "collect_results:barrel_hcal"
+    # - "collect_results:calo_pid"
+    # - "collect_results:ecal_gaps"
+    # - "collect_results:lfhcal"
+    # - "collect_results:material_scan"
+    # - "collect_results:pid"
+    # - "collect_results:tracking_performance"
+    # - "collect_results:tracking_performance_campaigns"
+    # - "collect_results:zdc_sigma"
+    # - "collect_results:zdc_lambda"
+    # - "collect_results:insert_neutron"
+    # - "collect_results:tracking_performances_dis"
+    # - "collect_results:zdc"
+    # - "collect_results:zdc_lyso"
+    # - "collect_results:zdc_neutron"
+    # - "collect_results:insert_muon"
+    # - "collect_results:insert_tau"
+    # - "collect_results:zdc_photon"
+    # - "collect_results:zdc_pi0"
+    # - "collect_results:femc_electron"
+    # - "collect_results:femc_photon"
+    # - "collect_results:femc_pi0"
+    - "collect_results/beamline"
   script:
     - snakemake $SNAKEMAKE_FLAGS --cores 1 results/metadata.json
     - find results -print | sort | tee summary.txt
diff --git a/Snakefile b/Snakefile
index c001f8b0..3350fb35 100644
--- a/Snakefile
+++ b/Snakefile
@@ -30,27 +30,27 @@ def find_epic_libraries():
     return libs
 
 
-include: "benchmarks/backgrounds/Snakefile"
-include: "benchmarks/backwards_ecal/Snakefile"
-include: "benchmarks/barrel_ecal/Snakefile"
-include: "benchmarks/calo_pid/Snakefile"
-include: "benchmarks/ecal_gaps/Snakefile"
-include: "benchmarks/material_scan/Snakefile"
-include: "benchmarks/tracking_performances/Snakefile"
-include: "benchmarks/tracking_performances_dis/Snakefile"
-include: "benchmarks/lfhcal/Snakefile"
-include: "benchmarks/zdc_lyso/Snakefile"
-include: "benchmarks/zdc_neutron/Snakefile"
-include: "benchmarks/insert_muon/Snakefile"
-include: "benchmarks/zdc_lambda/Snakefile"
-include: "benchmarks/zdc_photon/Snakefile"
-include: "benchmarks/zdc_pi0/Snakefile"
-include: "benchmarks/zdc_sigma/Snakefile"
-include: "benchmarks/insert_neutron/Snakefile"
-include: "benchmarks/insert_tau/Snakefile"
-include: "benchmarks/femc_electron/Snakefile"
-include: "benchmarks/femc_photon/Snakefile"
-include: "benchmarks/femc_pi0/Snakefile"
+#include: "benchmarks/backgrounds/Snakefile"
+#include: "benchmarks/backwards_ecal/Snakefile"
+#include: "benchmarks/barrel_ecal/Snakefile"
+#include: "benchmarks/calo_pid/Snakefile"
+#include: "benchmarks/ecal_gaps/Snakefile"
+#include: "benchmarks/material_scan/Snakefile"
+#include: "benchmarks/tracking_performances/Snakefile"
+#include: "benchmarks/tracking_performances_dis/Snakefile"
+#include: "benchmarks/lfhcal/Snakefile"
+#include: "benchmarks/zdc_lyso/Snakefile"
+#include: "benchmarks/zdc_neutron/Snakefile"
+#include: "benchmarks/insert_muon/Snakefile"
+#include: "benchmarks/zdc_lambda/Snakefile"
+#include: "benchmarks/zdc_photon/Snakefile"
+#include: "benchmarks/zdc_pi0/Snakefile"
+#include: "benchmarks/zdc_sigma/Snakefile"
+#include: "benchmarks/insert_neutron/Snakefile"
+#include: "benchmarks/insert_tau/Snakefile"
+#include: "benchmarks/femc_electron/Snakefile"
+#include: "benchmarks/femc_photon/Snakefile"
+#include: "benchmarks/femc_pi0/Snakefile"
 include: "benchmarks/beamline/Snakefile"
 
 use_s3 = config["remote_provider"].lower() == "s3"
@@ -121,24 +121,24 @@ awk -f {input.converter} {input.notebook} > {output}
 """
 
 
-rule metadata:
-    output:
-        "results/metadata.json"
-    shell:
-        """
-cat > {output} <<EOF
-{{
-  "CI_COMMIT_REF_NAME": "${{CI_COMMIT_REF_NAME:-}}",
-  "CI_COMMIT_SHA": "${{CI_COMMIT_SHA:-}}",
-  "CI_PIPELINE_ID": "${{CI_PIPELINE_ID:-}}",
-  "CI_PIPELINE_SOURCE": "${{CI_PIPELINE_SOURCE:-}}",
-  "CI_PROJECT_ID": "${{CI_PROJECT_ID:-}}",
-  "GITHUB_REPOSITORY": "${{GITHUB_REPOSITORY:-}}",
-  "GITHUB_SHA": "${{GITHUB_SHA:-}}",
-  "GITHUB_PR": "${{GITHUB_PR:-}}",
-  "PIPELINE_NAME": "${{PIPELINE_NAME:-}}"
-}}
-EOF
-# validate JSON
-jq '.' {output}
-"""
+#rule metadata:
+#    output:
+#        "results/metadata.json"
+#    shell:
+#        """
+#cat > {output} <<EOF
+#{{
+#  "CI_COMMIT_REF_NAME": "${{CI_COMMIT_REF_NAME:-}}",
+#  "CI_COMMIT_SHA": "${{CI_COMMIT_SHA:-}}",
+#  "CI_PIPELINE_ID": "${{CI_PIPELINE_ID:-}}",
+#  "CI_PIPELINE_SOURCE": "${{CI_PIPELINE_SOURCE:-}}",
+#  "CI_PROJECT_ID": "${{CI_PROJECT_ID:-}}",
+#  "GITHUB_REPOSITORY": "${{GITHUB_REPOSITORY:-}}",
+#  "GITHUB_SHA": "${{GITHUB_SHA:-}}",
+#  "GITHUB_PR": "${{GITHUB_PR:-}}",
+#  "PIPELINE_NAME": "${{PIPELINE_NAME:-}}"
+#}}
+#EOF
+## validate JSON
+#jq '.' {output}
+#"""
-- 
GitLab